Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860599.1_cds_XP_016514679.1_27106
CDS Infomation

[gene=LOC107831434] [db_xref=GeneID:107831434] [protein=1-aminocyclopropane-1-carboxylate synthase] [protein_id=XP_016514679.1] [location=join(12267..12437,12598..12729,12826..12986,13723..14734)] [gbkey=CDS]
Sequence

ATGGGATTTGAGAATGAGAAGAACAGCTCAATCTTATCTAAGCTCGCTACTAATGAAGAA
CATGGTGAAAACTCGCCATATTTTGATGGATGGAAAGCATACGATAACGATCCTTTTCAC
CCTCTGAAGAACCCTAATGGTGTTATCCAAATGGGTCTTGCTGAAAATCAGCTTTGTTTT
GACTTGATTGAGGAATGGATTAAGAGAAATCCAAACGCTTCAATTTGCACCACAGAAGGA
ATCAAATCTTTCAGGGCCATTGCCAACTTTCAAGATTATCACGGCCTACCTGAATTCAGA
AGCGCTATTGCGAAATTTATGGAGAAAACAAGAGGGGGAAGGGTTACGTTTGATCCAGAG
AGAGTAGTTATGGCTGGTGGTGCAACTGGAGCCAACGAAACAATTATATTTTGTTTGGCT
GATACAGGCGATGCATTCTTAGTACCTTCACCATACTATCCAGCATTTAACCGGGACTTA
AGATGGAGAACTGGAGTACAACTCATTCCAATTCCTTGCGACAGTTCCAACAACTTCCAA
ATCACTACAAAAGCTGTGAGAGAAGCATATGAAAATGCCCAGAAATCAAACATCAAAGTC
AAAGGCTTGATTTTGACCAACCCATCAAATCCATTAGGCACCACTTTGGACAGAGACACA
CTGAAAAATCTCTTGACCTTCACCAACCAACATAACATCCACCTCGTTTGCGACGAAATT
TACGCCGCAACTGTCTTTAATACACCTCAATTCGTCAGCATTGCTGAAATTCTCGACGAC
GAAACGAGCCATTGCAACAAAGATTTGGTTCATATCGTATACAGTCTTTCAAAAGACATG
GGCTTACCAGGATTCAGAGTCGGAATCGTGTATTCATTCAACGATGCCGTCGTTAATTGT
GCTAGAAAAATGTCGAGTTTTGGTTTAGTTTCCACTCAAACACAGTATTTGCTCGCTGAG
ATGTTATCCGACGAAAGATTCGTCTCAAATTTTCTAACTGAAAGCTCGAAGAGATTAGCT
AAAAGACACAAACATTTCACTAACGGACTCGAAGAAGTTGGAATTAAATGCTTGAGAAGC
AATGCTGGACTTTTCTGTTGGATGGATTTGCGACCACTTTTGAAAGAGTCAACTTTCGAC
TCAGAAATGTCATTATGGAGAGTGATTATAAATGACGTGAAGCTTAATGTCTCGCCGGGA
TCTTCATTTGATTGTCAAGAGCCAGGATTTTTTCGAGTTTGTTTCGCTAACATGGATGAT
GAAACTGTGGATATTGCATTAGCGAGGATTCGGAGTTTTGTGGGTGTTAAGAAAAGTGGA
GATGAATCGACTCCAATATTAATGGAGAAGAAGCAGCAATGGAAAAAGAACAATCTACGA
CTTAGTTTCTCGAAAAGAATGTACGATGAAAGTGTTAATTTGTCACCACTTTCATCTCCT
ATCCCTCATTCACCACTCGTTCGAGCTAGAACTTAA

Peptide Sequence

PEP ID

XP_016514679.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Nicotiana tabacum]
Sequence

MGFENEKNSSILSKLATNEEHGENSPYFDGWKAYDNDPFHPLKNPNGVIQMGLAENQLCF
DLIEEWIKRNPNASICTTEGIKSFRAIANFQDYHGLPEFRSAIAKFMEKTRGGRVTFDPE
RVVMAGGATGANETIIFCLADTGDAFLVPSPYYPAFNRDLRWRTGVQLIPIPCDSSNNFQ
ITTKAVREAYENAQKSNIKVKGLILTNPSNPLGTTLDRDTLKNLLTFTNQHNIHLVCDEI
YAATVFNTPQFVSIAEILDDETSHCNKDLVHIVYSLSKDMGLPGFRVGIVYSFNDAVVNC
ARKMSSFGLVSTQTQYLLAEMLSDERFVSNFLTESSKRLAKRHKHFTNGLEEVGIKCLRS
NAGLFCWMDLRPLLKESTFDSEMSLWRVIINDVKLNVSPGSSFDCQEPGFFRVCFANMDD
ETVDIALARIRSFVGVKKSGDESTPILMEKKQQWKKNNLRLSFSKRMYDESVNLSPLSSP
IPHSPLVRART

Transcript Sequence

Gene sequence data has not been registered.